Sorry if it took me a while to get back to you, but I haven't got any notifications of your posts.
What you mention is indeed a huge problem with v3.X. It is completely solved however in v4.0+, which in general has huge improvements over v3.0.
My recomendation would be that you update to v4.
You are also very welcome to leave comments on Github, where I do get notifications:
github.com/unreal4u/db_mysqli
Greetings.